Walks the canonical 4-level USDA key (Order -> Suborder -> Great Group -> Subgroup) using YAML rule files at:
inst/rules/usda/key.yaml: Order key (12 entries)inst/rules/usda/suborders/<order>.yamlinst/rules/usda/great-groups/<order>.yamlinst/rules/usda/subgroups/<order>.yaml
Usage
classify_usda(pedon, rules = NULL, on_missing = c("warn", "silent", "error"))Arguments
- pedon
A
PedonRecord.- rules
Optional pre-loaded rule set.
- on_missing
One of
"warn"(default),"silent","error".
Value
A ClassificationResult with deepest-level
taxon name. Each level's trace is in $trace.
